| 1 | Sat 6 Aug 2016 | 0-0 v North Ferriby UnitedNorth Ferriby United 0-0 Braintree Town | National League |
| 2 | Tue 9 Aug 2016 | 1-1 v EastleighBraintree Town 1-1 Eastleigh | National League |
| 3 | Sat 13 Aug 2016 | 61-3 v Macclesfield TownBraintree Town 1-3 Macclesfield Town | National League |
| 4 | Tue 16 Aug 2016 | 61-2 v Maidstone UnitedMaidstone United 2-1 Braintree Town | National League |
| 5 | Sat 27 Aug 2016 | 61-2 v BarrowBarrow 2-1 Braintree Town | National League |
| 6 | Mon 29 Aug 2016 | 61-3 v Torquay UnitedBraintree Town 1-3 Torquay United | National League |
| 7 | Sat 3 Sep 2016 | 60-0 v GuiseleyGuiseley 0-0 Braintree Town | National League |
| 8 | Sat 10 Sep 2016 | 61-4 v GatesheadBraintree Town 1-4 Gateshead | National League |
| 9 | Tue 13 Sep 2016 | 62-1 v Sutton UnitedSutton United 1-2 Braintree Town | National League |
| 10 | Sat 17 Sep 2016 | 60-1 v ChesterChester 1-0 Braintree Town | National League |
| 11 | Sat 1 Oct 2016 | 60-3 v Lincoln CityLincoln City 3-0 Braintree Town | National League |
| 12 | Sat 22 Oct 2016 | 61-6 v Dover AthleticDover Athletic 6-1 Braintree Town | National League |
| 13 | Tue 22 Nov 2016 | 62-2 v BromleyBraintree Town 2-2 Bromley | National League |
| 14 | Sat 22 Apr 2017 | 60-2 v BarrowBraintree Town 0-2 Barrow | National League |
| 15 | Sat 29 Apr 2017 | 60-2 v Aldershot TownAldershot Town 2-0 Braintree Town | National League |
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