| 1 | Sat 3 Aug | 172-3 v Chatham TownHerne Bay 2-3 Chatham Town | Friendly |
| 2 | Sun 11 Aug | 123-2 v Littlehampton TownLittlehampton Town 2-3 Herne Bay | Isthmian League - South East Division |
| 3 | Tue 20 Aug | 22-1 v Rayners LaneRayners Lane 1-2 Herne Bay | Emirates FA Cup Preliminary Round Replay |
| 4 | Mon 26 Aug | 20-0 v MargateMargate 0-0 Herne Bay | Isthmian League - South East Division |
| 5 | Sat 31 Aug | 22-0 v Ashford Town (Middx)Ashford Town (Middx) 0-2 Herne Bay | Emirates FA Cup First Qualifying Round |
| 6 | Sat 7 Sep | 21-0 v NorthwoodHerne Bay 1-0 Northwood | Isuzu FA Trophy First Qualifying Round |
| 7 | Tue 10 Sep | 21-2 v Hythe TownHythe Town 2-1 Herne Bay | Isthmian League - South East Division |
| 8 | Sat 14 Sep | 23-0 v HendonHerne Bay 3-0 Hendon | Emirates FA Cup Second Qualifying Round |
| 9 | Tue 17 Sep | 20-0 v Sheppey UnitedSheppey United 0-0 Herne Bay | Velocity Cup Second Round |
| 10 | Sat 21 Sep | 23-0 v Three BridgesHerne Bay 3-0 Three Bridges | Isuzu FA Trophy Second Qualifying Round |
| 11 | Tue 24 Sep | 25-1 v Erith TownHerne Bay 5-1 Erith Town | Kent Senior Cup First Round |
| 12 | Sat 28 Sep | 2 0-1 v Maidstone UnitedHerne Bay 0-1 Maidstone United | Emirates FA Cup Third Qualifying Round |
| 13 | Sat 5 Oct | 20-2 v Chichester CityChichester City 2-0 Herne Bay | Isuzu FA Trophy Third Qualifying Round |
| 14 | Tue 8 Oct | 22-0 v Steyning Town CommunityHerne Bay 2-0 Steyning Town Community | Isthmian League - South East Division |
| 15 | Sat 12 Oct | 23-5 v Sevenoaks TownHerne Bay 3-5 Sevenoaks Town | Isthmian League - South East Division |
| 16 | Tue 15 Oct | 22-1 v Eastbourne TownHerne Bay 2-1 Eastbourne Town | Isthmian League - South East Division |
| 17 | Sat 19 Oct | 5 3-1 v Phoenix SportsPhoenix Sports 1-3 Herne Bay | Isthmian League - South East Division |
| 18 | Tue 22 Oct | 51-4 v SittingbourneSittingbourne 4-1 Herne Bay | Isthmian League - South East Division |
| 19 | Sat 26 Oct | 2 0-4 v Sheppey UnitedHerne Bay 0-4 Sheppey United | Isthmian League - South East Division |
| 20 | Tue 29 Oct | 53-0 v MargateHerne Bay 3-0 Margate | Kent Senior Cup Second Qualifying Round |
| 21 | Sat 2 Nov | 51-4 v AFC Croydon AthleticAFC Croydon Athletic 4-1 Herne Bay | Isthmian League - South East Division |
| 22 | Tue 5 Nov | 61-1 v Hythe TownHerne Bay 1-1 Hythe Town | Isthmian League - South East Division |
| 23 | Sat 9 Nov | 20-2 v Eastbourne TownEastbourne Town 2-0 Herne Bay | Isthmian League - South East Division |
| 24 | Tue 12 Nov | 41-2 v RamsgateHerne Bay 1-2 Ramsgate | Isthmian League - South East Division |
| 25 | Sat 23 Nov | 40-3 v RamsgateRamsgate 3-0 Herne Bay | Isthmian League - South East Division |
| 26 | Tue 26 Nov | 174-3 v Three BridgesHerne Bay 4-3 Three Bridges | Isthmian League - South East Division |
| 27 | Tue 3 Dec | 2 1-2 v Tonbridge AngelsTonbridge Angels 2-1 Herne Bay | Kent Senior Cup Quarter Final |
| 28 | Sat 7 Dec | 151-3 v Ashford UnitedAshford United 3-1 Herne Bay | Isthmian League - South East Division |
| 29 | Sat 8 Feb | 20-0 v Broadbridge HeathHerne Bay 0-0 Broadbridge Heath | Isthmian League - South East Division |
| 30 | Sat 15 Feb | 21-1 v Sevenoaks TownSevenoaks Town 1-1 Herne Bay | Isthmian League - South East Division |
| 31 | Sat 22 Feb | 121-2 v Phoenix SportsHerne Bay 1-2 Phoenix Sports | Isthmian League - South East Division |
| 32 | Sat 15 Mar | 124-0 v East Grinstead TownEast Grinstead Town 0-4 Herne Bay | Isthmian League - South East Division |
| 33 | Sat 22 Mar | 120-2 v Burgess Hill TownHerne Bay 0-2 Burgess Hill Town | Isthmian League - South East Division |
| 34 | Sat 29 Mar | 20-1 v MersthamMerstham 1-0 Herne Bay | Isthmian League - South East Division |
| 35 | Sat 5 Apr | 29-1 v LancingHerne Bay 9-1 Lancing | Isthmian League - South East Division |
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