| 1 | Sat 3 Aug | 21-2 v Sevenoaks TownSevenoaks Town 2-1 Whitstable Town | Emirates FA Cup Extra Preliminary Round |
| 2 | Sat 10 Aug | 21-3 v RusthallWhitstable Town 1-3 Rusthall | Southern Counties East League Premier Division |
| 3 | Wed 14 Aug | 23-1 v Lydd TownLydd Town 1-3 Whitstable Town | Southern Counties East League Premier Division |
| 4 | Sat 24 Aug | 24-1 v Corinthian-CasualsCorinthian-Casuals 1-4 Whitstable Town | Isuzu FA Vase First Qualifying Round |
| 5 | Mon 26 Aug | 2 0-3 v Faversham TownWhitstable Town 0-3 Faversham Town | Southern Counties East League Premier Division |
| 6 | Sat 31 Aug | 24-2 v Hollands & BlairHollands & Blair 2-4 Whitstable Town | Southern Counties East League Premier Division |
| 7 | Tue 3 Sep | 22-1 v BearstedWhitstable Town 2-1 Bearsted | Southern Counties East League Premier Division |
| 8 | Sat 7 Sep | 20-1 v VCD AthleticWhitstable Town 0-1 VCD Athletic | Southern Counties East League Premier Division |
| 9 | Tue 10 Sep | 21-0 v KenningtonKennington 0-1 Whitstable Town | Southern Counties East League Premier Division |
| 10 | Sat 14 Sep | 22-2 v HolmesdaleHolmesdale 2-2 Whitstable Town | Southern Counties East League Premier Division |
| 11 | Sat 21 Sep | 21-0 v Hollands & BlairWhitstable Town 1-0 Hollands & Blair | Isuzu FA Vase Second Qualifying Round |
| 12 | Tue 24 Sep | 21-4 v Larkfield & New HytheWhitstable Town 1-4 Larkfield & New Hythe | Southern Counties East League Premier Division |
| 13 | Sat 28 Sep | 20-1 v StansfeldStansfeld 1-0 Whitstable Town | Southern Counties East League Premier Division |
| 14 | Sat 5 Oct | 21-2 v Punjab UnitedWhitstable Town 1-2 Punjab United | Southern Counties East League Premier Division |
| 15 | Sat 19 Oct | 21-0 v Virginia WaterWhitstable Town 1-0 Virginia Water | Isuzu FA Vase First Round |
| 16 | Sat 26 Oct | 22-0 v Tunbridge WellsTunbridge Wells 0-2 Whitstable Town | Southern Counties East League Premier Division |
| 17 | Sat 2 Nov | 23-3 v CorinthianWhitstable Town 3-3 Corinthian | Southern Counties East League Premier Division |
| 18 | Wed 13 Nov | 20-1 v Staplehurst MonarchsStaplehurst Monarchs 1-0 Whitstable Town | P&Co SCEFL Challenge Cup Second Round |
| 19 | Sat 16 Nov | 21-2 v GlebeGlebe 2-1 Whitstable Town | Southern Counties East League Premier Division |
| 20 | Sat 30 Nov | 23-0 v Erith & BelvedereWhitstable Town 3-0 Erith & Belvedere | Southern Counties East League Premier Division |
| 21 | Sat 14 Dec | 2 2-1 v Jersey BullsWhitstable Town 2-1 Jersey Bulls | Isuzu FA Vase Third Round |
| 22 | Sat 21 Dec | 23-0 v KenningtonWhitstable Town 3-0 Kennington | Southern Counties East League Premier Division |
| 23 | Sat 28 Dec | 23-4 v Faversham TownFaversham Town 4-3 Whitstable Town | Southern Counties East League Premier Division |
| 24 | Sat 4 Jan | 22-0 v StansfeldWhitstable Town 2-0 Stansfeld | Southern Counties East League Premier Division |
| 25 | Tue 14 Jan | 22-3 v Hollands & BlairWhitstable Town 2-3 Hollands & Blair | Southern Counties East League Premier Division |
| 26 | Sat 18 Jan | 21-1 v Walsham Le WillowsWalsham Le Willows 1-1 Whitstable Town | Isuzu FA Vase Fourth Round |
| 27 | Sat 25 Jan | 21-1 v Sutton AthleticWhitstable Town 1-1 Sutton Athletic | Southern Counties East League Premier Division |
| 28 | Sat 1 Feb | 22-1 v Fleet TownWhitstable Town 2-1 Fleet Town | Isuzu FA Vase Fifth Round |
| 29 | Tue 4 Feb | 22-1 v FisherFisher 1-2 Whitstable Town | Southern Counties East League Premier Division |
| 30 | Sat 8 Feb | 2 4-0 v Tunbridge WellsWhitstable Town 4-0 Tunbridge Wells | Southern Counties East League Premier Division |
| 31 | Tue 11 Feb | 23-1 v Snodland TownWhitstable Town 3-1 Snodland Town | Southern Counties East League Premier Division |
| 32 | Tue 18 Feb | 22-0 v BearstedBearsted 0-2 Whitstable Town | Southern Counties East League Premier Division |
| 33 | Tue 4 Mar | 22-0 v VCD AthleticVCD Athletic 0-2 Whitstable Town | Southern Counties East League Premier Division |
| 34 | Sat 8 Mar | 21-1 v Snodland TownSnodland Town 1-1 Whitstable Town | Southern Counties East League Premier Division |
| 35 | Tue 11 Mar | 2 2-1 v Lordswood AFCWhitstable Town 2-1 Lordswood AFC | Southern Counties East League Premier Division |
| 36 | Sat 15 Mar | 2 1-0 v Erith & BelvedereErith & Belvedere 0-1 Whitstable Town | Southern Counties East League Premier Division |
| 37 | Tue 18 Mar | 26-1 v HolmesdaleWhitstable Town 6-1 Holmesdale | Southern Counties East League Premier Division |
| 38 | Sat 22 Mar | 2 2-1 v Larkfield & New HytheLarkfield & New Hythe 1-2 Whitstable Town | Southern Counties East League Premier Division |
| 39 | Tue 15 Apr | 22-1 v Lydd TownWhitstable Town 2-1 Lydd Town | Southern Counties East League Premier Division |
| 40 | Thu 17 Apr | 23-0 v Lordswood AFCLordswood AFC 0-3 Whitstable Town | Southern Counties East League Premier Division |
| 41 | Sat 19 Apr | 26-0 v RusthallRusthall 0-6 Whitstable Town | Southern Counties East League Premier Division |
| 42 | Mon 21 Apr | 20-0 v FisherWhitstable Town 0-0 Fisher | Southern Counties East League Premier Division |
| 43 | Wed 23 Apr | 22-1 v CorinthianCorinthian 1-2 Whitstable Town | Southern Counties East League Premier Division |
| 44 | Sat 26 Apr | 23-2 v GlebeWhitstable Town 3-2 Glebe | Southern Counties East League Premier Division |
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